Interaction between nematodes and bacteria enhances soil carbon sequestration under organic material amendments.

The process of carbon (C) sequestration plays an important role in soil fertility and productivity, yet most studies have focused on the individual role of the bacterial community. However, an in-depth mechanistic understanding of how soil nematodes interact with the bacterial community to regulate soil C accumulation is still lacking. We conducted a 10-year field experiment to explore the nematode and bacterial communities and determine the influence of nematode-bacteria interactions on C mineralization, microbial metabolic quotient (qCO2), and carbon use efficiency (CUE) under the organic material amendments, including chemical fertilizers with straw (NS), chemical fertilizers with straw and pig manure (NSM), and chemical fertilizer with straw biochar (NB). Here, our results showed the abundance of bacterial and nematode communities was significantly higher under NS, NSM, and NB treatments than under chemical fertilizers (N) treatment, with the highest abundance under the NSM treatment. The enrichment index and functional dispersion index were significantly higher under NSM treatment than under N, NS, and NB treatments, while the channel index followed the opposite pattern. Structural equation modeling indicated that the potential predation pressure induced by nematodes may improve bacterial abundance, with positive cascading effects on C sequestration. Collectively, our study highlights the functional importance of nematode-microorganism interactions in mediating C dynamics under organic material amendments.

Soil polluted with nano ZnO reveals unstable bacterial communities and decoupling of taxonomic and functional diversities.

Due to relentless production and disposal of nano zinc oxide (nZnO), it has become critical to comprehend the serious risks large-scale accumulation of nZnO pose to bacterial communities in soil. The primary objective was to evaluate the changes in bacterial community structure and associated functional pathways through predictive metagenomic profiling and subsequent validation through Quantitative Realtime PCR in soil spiked with nZnO (0, 50, 200, 500 and 1000 mg Zn kg-1) and similar levels of bulk ZnO (bZnO). The results revealed that soil microbial biomass-C, -N, -P, soil respiration and enzyme activities decreased markedly at higher ZnO levels. The alpha diversity decreased with increasing ZnO level, with more impact under nZnO, while beta diversity analyses indicated a distinct dose- dependent separation of bacterial communities. The dominant taxa including Proteobacteria, Bacterioidetes, Acidobacteria and Planctomycetes significantly increased in abundance, while Firmicutes, Actinobacteria and Chloroflexi decreased in abundance with elevated nZnO and bZnO levels. Redundancy analysis indicated that changes in bacterial community structure instilled a greater dose- rather than size- specific response on key microbial parameters. Predicted key functions did not show a dose- specific response, and at 1000 mg Zn kg-1, methane metabolism as well as starch and sucrose metabolism were attenuated, while functions involving two component systems and bacterial secretion systems were enhanced under bZnO indicating better stress avoidance mechanism than under nZnO. Realtime PCR and microbial endpoint assays confirmed the metagenome derived taxonomic and functional data, respectively. Taxa and functions that varied substantially under stress were established as bioindicators to predict nZnO toxicity in soils. Taxon-function decoupling indicated that the soil bacterial communities deployed adaptive mechanisms under high ZnO, with lesser buffering capacity and resilience of communities under nZnO.

Ecotoxicological risk assessment in soils contaminated by Pb and As 20 years after a mining spill.

This study evaluates the potential toxicity of the soils of the Guadiamar Green Corridor (GGC) affected by the Aznalcóllar mine spill (Andalusia, Spain), one of the most important mining accidents in Europe in recent decades. Twenty years after the accident, although the area is considered to be recovered, residual contamination in soils persists, and the bioavailability of some contaminants, such as As, is showing trends of increasing. Therefore, the potential residual toxicity in 84 soil samples was evaluated by bioassays with lettuce (Latuca sativa L.), earthworms (Eisenia andrei) and determining the microbial activity by basal respiration and metabolic quotient. The selected soils sampled along the GGC were divided into 4 types according to their physicochemical properties. In the closest part of the mine two soil types appear (SS1 and SS2), originally decarbonated and loamy, with a reduction in lettuce root elongation of 57% and 34% compared to the control, as well as a the highest metabolic quotient (23.9 and 18.1 ng CcO2 µg Cmicrob-1 h-1, respectively) with the highest risk of Pb and As toxicity. While, located in the middle and final part of the affected area of the spill (SS3 and SS4), soils presented alkaline pH, finer textures and the lowest metabolic quotient (<9.5 ng CcO2 µg Cmicrob-1 h-1). In addition, due to Pb and As exceeded the Guideline values established in the studied area, the human toxicity risk was determined according to US-EPA methodology. Although the total contents were higher than the Guidelines established, the obtained hazard quotients for both contaminants were less than one, so the risk for human health was discarded. However, monitoring over time of the toxicity risks of the GGC soils would be advisable, especially due to the existence of areas where residual contamination persist, and soil hazard quotient obtained for As in children was higher and close to unity.

Spatial responses of soil carbon stocks, total nitrogen, and microbial indices to post-wildfire in the Mediterranean red pine forest.

Wildfire is a key ecological event that alters vegetation and soil quality attributes including biochemical attributes at spatial scale. This knowledge can provide insights into the development of better rehabilitation or restoration strategies that depend on the ecological dynamics of vegetation, fungi, and animals. The present study aimed to understand the causes and consequences of spatial variability of soil organic carbon, microbial biomass C concentrations, and soil quality indices as impacted by wildfire in a red pine forest. This study was conducted using kriging and inverse distance neighborhood similarity (IDW) interpolations methods. The carbon stocks were significantly (P = 0.002) higher in burned areas compared to those of unburned areas by 255% whereas microbial biomass carbon and microbial respiration were significantly (P < 0.0001 and P = 0.02) lower in burned areas by 66% and 90%, The Pearson's correlation analysis showed that carbon stocks were positively correlated with pH (0.61), total nitrogen (0.60) and ash quantity (0.41), but negatively correlated with microbial biomass carbon (-0.46) and nitrogen (-0.61), and microbial respiration (-0.48). The IDW interpolation method better-predicted pH, bulk density, and microbial biomass carbon and nitrogen compared to kriging interpolation, whereas the kriging interpolation method was better than IDW interpolation for the other studied soil properties. We concluded that pH, EC, SOC, C/N, MR, MBC/SOC, and MBC/MBN can be reliable indicators to monitor the effect of wildfire on forest soils. The wildfire event increased soil carbon stocks, TN, pH, and qCO2, but decreased MBC and MBN.

Effects of microplastics on soil carbon dioxide emissions and the microbial functional genes involved in organic carbon decomposition in agricultural soil.

The accumulation of microplastics (MPs) in agricultural fields can not only disguise soil organic carbon (SOC) storage but also affect the production of carbon dioxide (CO2) by microbial decomposition. However, little is known about the impact of this emerging pollutant on soil CO2 emissions and the functional genes related to SOC degradation. In the present study, a short-term (30-day) microcosm experiment was performed to investigate the effects of virgin and aged low-density polyethylene (LDPE) MPs on soil CO2 emissions. We also measured functional gene abundances related to starch (sga), hemicellulose (abfA, manB and xylA), cellulose (cex) and lignin (lig and mnp) degradation through a high-throughput quantitative-PCR-based chip. Compared with the soils without MPs, low doses (0.01% and 0.1%) of both virgin and aged MPs had negligible effects on SOC decomposition, whereas a high dose (1.0%) of these two MPs significantly (p < 0.05) accelerated the production of CO2 in soils by 15-17%, showing a dose-dependent effect. The presence of MPs did not significantly affect soil dissolved organic carbon or microbial biomass carbon. A higher metabolic quotient at 1.0% MP concentration indicated that the microbes were stressed and needed more substrates and energy during their metabolic process, which could likely explain the increase in CO2 emission induced by this dose of MPs. Exposure to virgin MPs significantly reduced the functional genes related to hemicellulose (abfA and manB) degradation, whereas increasing the aged MPs concentrations significantly decreased the abundances of functional genes encoding starch (sga), hemicellulose (abfA, manB and xylA), and cellulose (cex) hydrolysis. Overall, we conclude that the low dose (<0.1%) of MPs in the soils has a negligible effect on the production of CO2, but this factor should be considered in evaluating the global C budget in future research as this contaminant reaches a certain threshold (1.0%).

Impact of ZnO nanoparticles on soil lead bioavailability and microbial properties.

In the present study, we investigated the responses of microbial respiration and community structure, enzyme activity and DTPA-extractable Pb within 60 days of incubation in soils treated with Pb and nano-ZnO. The results showed that when the concentration of nano-ZnO exceeded 10 mg/kg, the concentration of DTPA-extractable Pb significantly decreased by 10.6%-21.3% on the 60th day of the experiment. The addition of nano-ZnO decreased the Pb-contaminated soil pH from 6.18 to 6.08 at 7 days, which is part of the reason for the ß-glucosidase activity change. Ten mg/kg nano-ZnO significantly reduced the qCO2 value, which represented the microbial energy demand for the conversion of carbon sources into biomass. Nano-ZnO improved the microbial diversity and richness of some metal-tolerant bacteria at 60 days. The findings provide deeper insight into the responses of soil microbes and Pb bioavailability in the presence of nano-ZnO particles.

Biochar aging alters the bioavailability of cadmium and microbial activity in acid contaminated soils.

The effects of biochar aging on heavy-metal bioavailability and microbial activity are not fully understood. This study determined the effect over 270 days of poultry-litter biochar (PBC) and sugar-gum-wood biochar (SBC) on the bioavailability of Cd and microbial activity in acidic soils differing in organic matter content. Soil basal and substrate-induced respirations, microbial properties, Cd bioavailability and plant Cd bioaccumulation were evaluated at 1, 30, 90 and 270 days. The addition of PBC decreased Cd bioaccumulation by 81% and 85% while SBC decreased bioaccumulation by 47% and 56% in high (Chromosol) and low (Sodosol) organic matter soils, respectively, at Day 1. By Day 270, Cd bioaccumulation significantly (P < 0.05) increased in SBC-amended soils but decreased in PBC-amended soils. The addition of PBC increased both basal and substrate-induced microbial respirations compared to the other treatments over 270-day aging. However, SBC increased microbial biomass C compared to the PBC after Day 30. Aging decreased microbial respiration and biomass C in biochar-amended soils. It is concluded that Cd bioaccumulation increased in SBC-amended soils during aging whereas the PBC decreased Cd bioaccumulation and that the selection of biochar is important to enhance remediation efficiency in the long term.

Leaf litter identity rather than diversity shapes microbial functions and microarthropod abundance in tropical montane rainforests.

In tropical forest ecosystems leaf litter from a large variety of species enters the decomposer system, however, the impact of leaf litter diversity on the abundance and activity of soil organisms during decomposition is little known. We investigated the effect of leaf litter diversity and identity on microbial functions and the abundance of microarthropods in Ecuadorian tropical montane rainforests. We used litterbags filled with leaves of six native tree species (Cecropia andina, Dictyocaryum lamarckianum, Myrcia pubescens, Cavendishia zamorensis, Graffenrieda emarginata, and Clusia spp.) and incubated monocultures and all possible two- and four-species combinations in the field for 6 and 12 months. Mass loss, microbial biomass, basal respiration, metabolic quotient, and the slope of microbial growth after glucose addition, as well as the abundance of microarthropods (Acari and Collembola), were measured at both sampling dates. Leaf litter diversity significantly increased mass loss after 6 months of exposure, but reduced microbial biomass after 12 months of exposure. Leaf litter species identity significantly changed both microbial activity and microarthropod abundance with species of high quality (low C-to-N ratio), such as C. andina, improving resource quality as indicated by lower metabolic quotient and higher abundance of microarthropods. Nonetheless, species of low quality, such as Clusia spp., also increased the abundance of Oribatida suggesting that leaf litter chemical composition alone is insufficient to explain variation in the abundances of soil microarthropods. Overall, the results provide evidence that decomposition and microbial biomass in litter respond to leaf litter diversity as well as litter identity (chemical and physical characteristics), while microarthropods respond only to litter identity but not litter diversity.

Land use intensification destabilizes stream microbial biodiversity and decreases metabolic efficiency.

Urbanization and agricultural intensification can transform landscapes. Changes in land-use can lead to increases in storm runoff and nutrient loadings which can impair the health and function of stream ecosystems. Microorganisms are an integral component of stream ecosystems. Due to the sensitivity of microorganisms to perturbations, changes in hydrology and water chemistry may alter microbial activity and structure. These shifts in microbial community dynamics may alter stream metabolism and water quality, potentially impacting higher trophic levels. Here we examine the effects of land-use and associated changes in water chemistry on sediment microbial communities by studying the West Run Watershed (WRW) a mixed-land-use system in West Virginia, USA. Streams were sampled throughout the growing season at six sites within the WRW spanning different levels of land use intensification. The proportion of land impacted by agricultural and urban development was positively correlated with temporal variation in stream sediment microbial community composition (adj R2 = 0.65), suggesting development can destabilize microbial communities. Moreover, streams in developed watersheds had an increased metabolic quotient (20-50% higher), this indicates that microorganisms have greater respiration per unit biomass and signifies reduced metabolic efficiency. Further, our results suggest that land use associated changes in water chemistry alter microbial function both directly and indirectly via changes in microbial community composition and biomass. Taken together our results suggest that highly developed watersheds with elevated conductivity, metal ion concentration, and pH impose stress on microbial communities resulting in reduced microbial efficiency and elevated respiration.

Wastewaters from citrus processing industry as natural biostimulants for soil microbial community.

Citrus fruit processing wastewaters (CWWs), being rich in organic matter, may be a valuable resource for agricultural irrigation and, possibly, for the improvement of soil organic carbon (TOC). This issue is becoming crucial for soils of arid and semiarid environments increasingly experiencing water scarcity and continuous decline of TOC towards levels insufficient to sustain crop production. However, before using CWWs in agriculture their effects on the soil living component have to be clarified. Therefore, in this study we assessed the impact of CWWs on soil chemical and biochemical properties. Under laboratory conditions, lemon, orange and tangerine wastewaters were separately added to a sandy clay soil reaching 1/3, 2/3 and 3/3 of its 50% water holding capacity. Then soils were incubated for 56 days at 22-24 °C in the dark and analyzed for total and extractable organic C, microbial biomass C and N, and the main microbial groups at days 7, 28 and 56, while microbial respiration kinetics was fitted to a first-order decay model by nine distinct daily rates measurements throughout incubation. During the first 3 days following the addition of CWWs, soil pH decreased by 2-3 units; however, afterwards the soil recovered its initial pH values. Total and extractable C pools, as well as microbial biomass C and N, were stimulated by CWWS with such a stimulation depending on CWWs type and added dose. Also microbial respiration kinetics was greatly affected by CWWs, although the effects were generally ephemeral at the lowest two doses, whereas at the highest dose still persisted up to day 56, especially in orange and lemon wastewaters. The concomitant general increase of both microbial and metabolic quotients after the addition of CWWs suggested that also under stress conditions, soil microorganisms were able to immobilize C. Both bacteria and fungi were stimulated by CWWs but the latter, at the beginning of incubation, were more favored probably due to a transient soil acidification by CWWs. In conclusion, CWWs when added to a sandy-clay soil increased total and labile C pools, stimulated soil microbial activity and biomass, i.e. improved the overall biological soil fertility, thus suggesting a possible role of CWWs in sustainable agriculture. However, soil electrical conductivity has to be monitored when CWWs are applied recurrently.

[Variations in topsoil carbon and nitrogen contents of five temperate plantations in Northeast China.] / 东北5种温带人工林表层土壤碳氮含量的分异.

Afforestation is an effective way for carbon (C) sequestration, which also profoundly influences soil nitrogen (N) dynamics in the forest ecosystem. The impacts of tree species on soil C and N budgets and the underlying mechanism remain uncertain. In this study, we used a common garden experiment and measured the soil organic C (Csoil) and total N contents (Nsoil) of the topsoil (0-10 cm) and related vegetative and soil microbial properties in 2007 and 2015 (3 and 11 years after afforestation), respectively. Our aim was to explore the effects of five major tree species (i.e., Fraxinus mandshurica, Juglans mandshurica, Betula platyphylla, Larix gmelinii and Pinus sylvestris var. mongolica) in the temperate forests in Northeast China on soil C and N contents and their dri-vers. The results showed that both Csoil and Nsoil of the five stands decreased as the stand ages increased, the change rates of which were significantly correlated with each other. The rate of change in Csoil(2.6%·a-1-4.8%·a-1) was significantly greater than that in Nsoil(0.8%·a-1-2.8%·a-1). The decrements of the Csoil and Nsoil for the broadleaved stands were significantly lower than those of the coniferous stands. The tree-species traits and microbial properties together explained 68.5% and 90.9% of the variability of the change rates of Csoil and Nsoil, respectively. The change rates of Csoil and Nsoil decreased with the increases in leaf litter C/N and microbial biomass C/N, but increased with the increases of fine root biomass, microbial biomass C, and the ratio of the C-acquisition to the N-acquisition enzyme activity. Additionally, the change rate of Nsoil decreased with the increases of the leaf litter production and the microbial metabolic activity. Our findings indicated that C and N contents in the topsoil of these temperate plantations decreased significantly 11 years after afforestation, while the different change rates mainly resulted from different properties of tree species and soil microbes.

Aridity thresholds of soil microbial metabolic indices along a 3,200 km transect across arid and semi-arid regions in Northern China.

Soil microbial processes are crucial for understanding the ecological functions of arid and semi-arid lands which occupy approximately 40% of the global terrestrial ecosystems. However, how soil microbial metabolic activities may change across a wide aridity gradient in drylands remains unclear. Here, we investigated three soil microbial metabolic indices (soil organic carbon (SOC)-based microbial respiration, metabolic quotient, and microbial biomass as a proportion of total SOC) and the degree of carbon limitation for microbial respiration along a 3,200 km transect with a wide aridity gradient. The aridity gradient was customarily expressed using the aridity index (AI) which was calculated as the ratio of mean annual precipitation to mean annual evaporation, therefore, a lower AI value indicated a higher degree of aridity. Our results showed non-linear relationships between AI values and the metabolic indices with a clear aridity threshold for each of the three metabolic indices along the aridity gradient, respectively (AI = 0.13 for basal respiration, AI = 0.17 for metabolic quotient, and AI = 0.17 for MBC:SOC ratio). These metabolic indices linearly declined when AI was above the thresholds, but did not show any clear patterns when AI was below the thresholds. We also found that soil microbial respiration was highly limited by available carbon substrates at locations with higher primary production and relatively lower level of water limitation when AI was above the threshold, a counter-intuitive pattern that microbes were more starved in ecosystems with more substrate input. However, the increasing level of carbon limitation did correspond to the declining trend of the three metabolic indices along the AI gradient, which indicates that the carbon limitation influences microbial metabolism. We also found that the ratio of microbial biomass carbon to SOC in arid regions (AI < 0.2) with extremely low precipitation and primary production were not quantitatively related to SOC content. Overall, our results imply that microbial metabolism is distinctively different in arid lands than in non-arid lands.

Relationships between waste physicochemical properties, microbial activity and vegetation at coal ash and sludge disposal sites.

The aim of the study was to assess the relationships between vegetation, physicochemical and microbial properties of substrate at coal ash and sludge disposal sites. The study was performed on 32 plots classified into 7 categories: dried ash sedimentation ponds, dominated by a grass Calamagrostis epigejos (AH-Ce), with the admixture of Pinus sylvestris (AH-CePs) or Robinia pseudoacacia (AH-CeRp), dry ash landfill dominated by Betula pendula and Pinus sylvestris (AD-BpPs) or Salix viminalis (AD-Sv) and coal sludge pond with drier parts dominated by Tussilago farfara (CS-Tf) and the wetter ones by Cyperus flavescens (CS-Cf). Ash sites were covered with soil layer imported as a part of technical reclamation. Ash had relatively high concentrations of some alkali and alkaline earth metals, Mn and pH, while coal sludge had high water and C, S, P and K contents. Concentrations of heavy metals were lower than allowable limits in all substrate types. Microbial biomass and, particularly, enzymatic activity in ash and sludge were generally low. The only exception were CS-Tf plots characterized by the highest microbial biomass, presumably due to large deposits of organic matter that became available for aerobic microbial biomass when water level fell. The properties of ash and sludge adversely affected microbial biomass and enzymatic activity as indicated by significant negative correlations between the content of alkali/alkaline earth metals, heavy metals, and macronutrients with enzymatic activity and/or microbial biomass, as well as positive correlations of these parameters with metabolic quotient (qCO2). Plant species richness and cover were relatively high, which may be partly associated with alleviating influence of soil covering the ash. The effect of the admixture of R. pseudoacacia or P. sylvestris to stands dominated by C. epigejos was smaller than expected. The former species increased NNH4, NNO3 and arylsulfatase activity, while the latter reduced activity of the enzyme.

[Characteristics of soil organic carbon mineralization in low altitude and high altitude forests in Wuyi Mountains, southeastern China]. / 武夷山低海拔和高海拔森林土壤有机碳的矿化特征.

Examining the variations of soil organic carbon mineralization at different altitudes is crucial for better understanding of soil organic carbon (SOC) dynamics. We selected the low altitude and high altitude broad-leaved forest soils in Wuyi Mountains as the research object, and incubated them under particular annual average temperature (17 and 9 ℃, respectively) in laboratory to investigate the difference of SOC mineralization characteristics. The results showed that the cumulative SOC mineralization had no significant difference between forest soils at low and high altitude in a 126-day incubation period under ambient temperature. Soil organic carbon content of high altitude soil was significantly higher than that from low altitude. The dynamics of SOC mineralization could fitted by the first-order kinetics. Both mineralization potential (CP) and mineralization rate constant (K) values of two soils had no significant difference, but CP/SOC value and mineralization ratio were significantly higher at low altitude, indicating that the carbon sequestration capacity of low altitude soil was relatively lower than that of high altitude under ambient temperature. Soil microbial biomass carbon and microbial quotients were significantly higher than that of low altitude with the increase of incubation time, indicating that the ability of microbial carbon assimilation was greater at high altitude. On the other hand, the activities of ß-1,4-glucosidase and cellobiohydrolase in high altitude soil were higher, suggesting that more labile carbon would be decomposed by soil microbes. The carbon sequestration capacity and microbial carbon utilization efficiency in high altitude soil would be reduced and thus result in a decline of soil organic carbon storage under the scenarios of climate warming.

Impact of heavy metal on activity of some microbial enzymes in the riverbed sediments: Ecotoxicological implications in the Ganga River (India).

We studied the extracellular enzyme activity (EEA) in the riverbed sediment along a 518km gradient of the Ganga River receiving carbon and nutrient load from varied human sources. Also, we tested, together with substrate-driven stimulation, if the heavy metal accumulated in the sediment inhibits enzyme activities. Because pristine values are not available, we considered Dev Prayag, a least polluted site located 624km upstream to main study stretch, as a reference site. There were distinct increases in enzyme activities in the sediment along the study gradient from Dev Prayag, however, between-site differences were in concordance with sediment carbon(C), nitrogen (N) and phosphorus (P). Fluorescein diacetate hydrolysis (FDAase), ß-glucosidase (Glu) and protease activities showed positive correlation with C, N and P while alkaline phosphatase was found negatively correlated with P. Enzyme activities were found negatively correlated with heavy metal, although ecological risk index (ERi) varied with site and metal species. Dynamic fit curves showed significant positive correlation between heavy metal and microbial metabolic quotient (qCO2) indicating a decrease in microbial activity in response to increasing heavy metal concentrations. This study forms the first report linking microbial enzyme activities to regional scale sediment heavy metal accumulation in the Ganga River, suggests that the microbial enzyme activities in the riverbed sediment were well associated with the proportion of C, N and P and appeared to be a sensitive indicator of C, N and P accumulation in the river. Heavy metal accumulated in the sediment inhibits enzyme activities, although C rich sediment showed relatively low toxicity due probably to reduced bioavailability of the metal. The study has relevance from ecotoxicological as well as from biomonitoring perspectives.

Altered humin compositions under organic and inorganic fertilization on an intensively cultivated sandy loam soil.

Humin is the most recalcitrant fraction of soil organic matter (SOM). However, little is known about quantitative structural information on humin and the roles of soil mircoorganisms involved in the humin formation. We applied advanced solid-state 13C nuclear magnetic resonance (NMR) spectroscopy to provide deep insights into humin structural changes in response to long-term balanced fertilization on a Calcaric Fluvisol in the North China plain. The relationships between humin structure and microbiological properties such as microbial biomass, microbial quotient (qmic) and metabolic quotient (qCO2) were also studied. The humins had a considerable (35-44%) proportion of aromatic C being nonprotonated and the vast majority of O-alkyl and anomeric C being protonated. Alkyl (24-27% of all C), aromatic C (17-28%) and O-alkyl (13-20%) predominated in humins. Long-term fertilization promoted the aliphatic nature of humins, causing increases in O-alkyl, anomeric and NCH functional groups and decreases in aromatic C and aromatic CO groups. All these changes were more prominent for treatments of organic fertilizer (OF) and combined mineral NPK fertilizer with OF (NPKOF) relative to the Control and NPK treatments. Fertilization also decreased the alkyl/O-alkyl ratio, aromaticity and hydrophobic characteristics of humins, suggesting a more decomposed and humified state of humin in the Control soil. Moreover, the soil microbiological properties had strong correlations with functional groups of humins. Particularly, microbial biomass C was a relatively sensitive indicator, having positive correlations with oxygen-containing functional groups, i.e., COO/NCO and protonated O-alkyl C, and negative correlations with nonprotonated aromatic C. The qmic and qCO2 were also significantly positively correlated with NCH and aromatic CO, respectively. Our results deepen our understanding of how long-term fertilization impacts the structure of humin, and highlight a linkage between microbiological properties and recalcitrant fraction of SOM besides labile fraction.

Influence of nitrogen-rich substrates on biogas production and on the methanogenic community under mesophilic and thermophilic conditions.

Grass silage was evaluated as a possible substrate in anaerobic digestion for generation of biogas in mesophilic and thermophilic long-term operation. Furthermore, the molecular biological parameter Metabolic Quotient (MQ) was evaluated as early warning system to predict process disturbance. Since this substrate is rich in nitrogen, high ammonia concentration of up to 2.2 g * kgFM-1 emerged. The high buffer capacity of the ammonium/ammonia system can disguise upcoming process acidification. At organic loading rates (OLR) below 1.0 kgVS * m-3 * d-1 (VS: volatile solids) for thermophilic and below 1.5 kgVS * m-3 * d-1 for mesophilic reactors, stable processes were established. With increasing OLR, the process was stressed until it broke down in the thermophilic reactors at an OLR of 3.5 kgVS * m-3 * d-1 or was stopped at an OLR of 4.5 kgVS * m-3 * d-1 in the mesophilic reactors. Mainly propionic acid accumulated in concentrations of up to 6.5 g * kgFM-1. Due to the high buffer capacity of the reactor sludge, the chemical parameter TVA/TIC (ratio of total volatile acids to total inorganic carbon) did not clearly indicate process disturbance in advance. In contrast, the MQ indicated metabolic stress of the methanogens before process breakdown and thus showed its potential as early warning system for process breakdown. During the whole experiment, hydrogenotrophic methanogens dominated. In the thermophilic reactors, Methanoculleus IIA-2 sp. 2 and Methanothermobacter wolfeii were dominant during stable process conditions and were displaced by Methanobacterium III sp. 4, a possible new bioindicator for disturbances at these conditions. In the mesophilic reactors, mainly Methanobacterium III sp. 4 was dominant at stable, stressed and acidified processes. A hitherto uncultivated genospecies, Methanobacteriaceae genus IV(B) sp. 3 was determined as possible new bioindicator for mesophilic process disturbance.

Zinc oxide nanoparticles affect carbon and nitrogen mineralization of Phoenix dactylifera leaf litter in a sandy soil.

We investigated the impact of zinc oxide nanoparticles (ZnO NPs; 1000mgkg-1 soil) on soil microbes and their associated soil functions such as date palm (Phoenix dactylifera) leaf litter (5gkg-1 soil) carbon and nitrogen mineralization in mesocosms containing sandy soil. Nanoparticles application in litter-amended soil significantly decreased the cultivable heterotrophic bacterial and fungal colony forming units (cfu) compared to only litter-amended soil. The decrease in cfu could be related to lower microbial biomass carbon in nanoparticles-litter amended soil. Likewise, ZnO NPs also reduced CO2 emission by 10% in aforementioned treatment but this was higher than control (soil only). Labile Zn was only detected in the microbial biomass of nanoparticles-litter applied soil indicating that microorganisms consumed this element from freely available nutrients in the soil. In this treatment, dissolved organic carbon and mineral nitrogen were 25 and 34% lower respectively compared to litter-amended soil. Such toxic effects of nanoparticles on litter decomposition resulted in 130 and 122% lower carbon and nitrogen mineralization efficiency respectively. Hence, our results entail that ZnO NPs are toxic to soil microbes and affect their function i.e., carbon and nitrogen mineralization of applied litter thus confirming their toxicity to microbial associated soil functions.

Microbial activities in soil cultivated with corn and amended with sewage sludge.

BACKGROUND: One of the main concerns related to the increasing use of sewage sludge in the soil is the possible presence of excess nutrients, which could cause environmental problems and detrimental effects on the soil microorganisms, considered essential to soil nutrient cycling. Thus, the objective of this work was to evaluate the microbial biomass and activity and some chemical characteristics of one specific tropical soil, classified as Dark Red Distroferric Latosol, of a loamy/clayey texture, in a long-term field experiment using anaerobically digested household sludge amendment. The sludge doses applied were the recommended dose and 2, 4 and 8 times the recommended dose. The authors hypothesized that the frequent application of this compound to the soil, even when using the recommended dose, could affect the available phosphorus (Pav) and heavy metal contents of the soil, resulting in concentrations above the needs of the culture as well as negatively affecting the activity of the soil microorganisms. RESULTS: The results demonstrated that successive applications of sludge, calculated considering the recommended dose of N for corn, did not increase the soil Pav contents in relation to the treatment in which the fertilizer was applied considering the nutrient needs of the culture, contrary to what happened with the highest sludge doses. The Cr, Ni and Cu contents increased with increase in sludge dose, but did not surpass the limits considered inadequate. There were no accentuated differences between the treatments with respect to microbial biomass C. Basal respiration and the FDA hydrolysis were considered to be the parameters that most differentiated the effect of increasing sludge doses on the microbial activity. CONCLUSION: The application of a sludge dose to a tropical soil, based on the recommended dose, did not affect the Pav or heavy metal contents of the soil even after years of application. Since there were no differences between the treatments with respect to the Cmic values, to the contrary of what happened with the other microbiological parameters evaluated, the possibility of changes in the composition of the microbial community with the higher sludge doses was considered.

Efeitos de herbicidas na atividade da microbiota rizosférica e no crescimento da cana-de-açùcar / Herbicide effects on the atividadade rhizospheric microbial and growth of sugar cane

Objetivou-se neste trabalho avaliar os efeitos de herbicidas na atividade da microbiota rizosférica e no crescimento da cana-de-açúcar. Para isso, sete herbicidas (tembotrione, MSMA, diuron+hexazinone, sulfentrazone, trifloxysulfuron-sodiun, tebuthiuron e clomazone) foram aplicados em pós-emergência da cana-de-açúcar cultivada em vaso contendo 12 dm3 de substrato (solo + fertilizantes). Foram avaliados os efeitos desses produtos na evolução do CO2 do solo (C-CO2), no carbono da biomassa microbiana (CBM), no quociente metabólico (qCO2), na atividade da enzima fosfomonoesterase ácida do solo rizosférico em amostras de solo coletadas aos 44 dias após aplicação dos herbicidas (DAT) e os efeitos no crescimento aos 77 DAT. Inicialmente os herbicidas MSMA, clomazone, sulfentrazone e trifloxysulfuron-sodium causaram intoxicação à cultura. Todavia, apenas nas plantas tratadas com o trifloxysulfuron-sodium esses sintomas permaneceram visíveis no momento da colheita do experimento. Quanto aos efeitos dos herbicidas sobre a atividade da microbiota rizoférica da cana-de-açúcar, o sulfentrazone e tebuthiuron reduziram a C-CO2 e o MSMA, tebuthiuron e clomazone reduziram o CBM do solo. O clomazone foi o herbicida que causou o maior impacto na atividade da microbiota, pois aumentou o valor do qCO2. Por outro lado, o sulfentrazone reduziu os valores dessa variável, contribuindo para o equilíbrio da microbiota no solo. Não houve influência dos herbicidas na atividade da fosfomonoesterase ácida do solo rizosférica da cana-de-açúcar.

The objective of this study was to evaluate the effects of herbicides used in their recommended doses, on the activity of the microbiota and sugar cane growth. For this, seven herbicides (tembotrione, MSMA, hexazinone + diuron, sulfentrazone, trifloxysulfuron-sodiun, and tebuthiuron cloamzone) were applied in pots containing 12 dm3 substrate (soil + fertilizer) at 50 days after sugarcane planting. The effects of these products on the evolution of soil CO2 (CO2-C), in the microbial biomass carbon (MBC), metabolic quotient (qCO2), enzyme activity in the rhizosphere acid phosphomonoesterase in rhizosphere soil samples collected at 44 days after herbicide application (DAT) and the growth effects at 77 DAT. Initially herbicides MSMA, clomazone, sulfentrazone and trifloxysulfuron-sodium caused poisoning in culture. However, only plants treated with trifloxysulfuron-sodium, these symptoms remained visible at harvest of the experiment. The effects of herbicides on microbial activity rizoferica of sugar cane, sulfentrazone and tebuthiuron reduced CO2-C and MSMA herbicide clomazone and reduced the CBM soil. The herbicide clomazone was that caused the greatest impact on microbial activity because of the increased value qCO2. Moreover, the sulfentrazone reduced values of that variable, contributing to the balance of microflora in the soil. No influence of herbicides on the activity of acid phosphomonoesterase rhizospheric on the sugarcane soil.